HL_4V6P_075

3D structure

PDB id

4V6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

13.5 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

4V6P|1|BB|U|1396, 4V6P|1|BB|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6P|1|BB|G|1389
4V6P|1|BB|U|1390
4V6P|1|BB|U|1391
4V6P|1|BB|A|1392
4V6P|1|BB|A|1393
4V6P|1|BB|U|1394
4V6P|1|BB|A|1395
4V6P|1|BB|U|1396
4V6P|1|BB|U|1397
4V6P|1|BB|C|1398

Current chains

Chain BB

23S ribomosomal RNA

Nearby chains

Chain BV

50S ribosomal protein L23