3D structure

PDB id
4V6P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)
Experimental method
ELECTRON MICROSCOPY
Resolution
13.5 Å

Loop

Sequence
GCGACGGUUGUC
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V6P|1|BB|G|1450
4V6P|1|BB|C|1451
4V6P|1|BB|G|1452
4V6P|1|BB|A|1453
4V6P|1|BB|C|1454
4V6P|1|BB|G|1455
4V6P|1|BB|G|1456
4V6P|1|BB|U|1457
4V6P|1|BB|U|1458
4V6P|1|BB|G|1459
4V6P|1|BB|U|1460
4V6P|1|BB|C|1461

Current chains

Chain BB
23S ribomosomal RNA

Nearby chains

Chain BP
50S ribosomal protein L17

Coloring options:

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