HL_4V6P_112

3D structure

PDB id

4V6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

13.5 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

4V6P|1|AA|C|841, 4V6P|1|AA|U|842, 4V6P|1|AA|U|843, 4V6P|1|AA|G|844, 4V6P|1|AA|A|845

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6P|1|AA|C|840
4V6P|1|AA|C|841
4V6P|1|AA|U|842
4V6P|1|AA|U|843
4V6P|1|AA|G|844
4V6P|1|AA|A|845
4V6P|1|AA|G|846

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AC

mRNA

Chain AE

30S ribosomal protein S2

Chain AU

30S ribosomal protein S18

Chain AX

30S ribosomal protein S21