HL_4V6Q_095

3D structure

PDB id

4V6Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

11.5 Å

Loop

Sequence

UGGUCGGACAUCA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6Q|1|BB|U|2302
4V6Q|1|BB|G|2303
4V6Q|1|BB|G|2304
4V6Q|1|BB|U|2305
4V6Q|1|BB|C|2306
4V6Q|1|BB|G|2307
4V6Q|1|BB|G|2308
4V6Q|1|BB|A|2309
4V6Q|1|BB|C|2310
4V6Q|1|BB|A|2311
4V6Q|1|BB|U|2312
4V6Q|1|BB|C|2313
4V6Q|1|BB|A|2314

Current chains

Chain BB

23S ribomosomal RNA

Nearby chains

Chain BA

5S ribosomal RNA; 5S rRNA

Chain BG

50S ribosomal protein L5