HL_4V6R_072

3D structure

PDB id

4V6R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

11.5 Å

Loop

Sequence

GGUGAAAAGCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6R|1|BB|G|1280
4V6R|1|BB|G|1281
4V6R|1|BB|U|1282
4V6R|1|BB|G|1283
4V6R|1|BB|A|1284
4V6R|1|BB|A|1285
4V6R|1|BB|A|1286
4V6R|1|BB|A|1287
4V6R|1|BB|G|1288
4V6R|1|BB|C|1289
4V6R|1|BB|C|1290

Current chains

Chain BB

23S ribomosomal RNA

Nearby chains

Chain B3

50S ribosomal protein L32

Chain BP

50S ribosomal protein L17

Chain BU

50S ribosomal protein L22