HL_4V6T_023

3D structure

PDB id

4V6T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading

Experimental method

ELECTRON MICROSCOPY

Resolution

8.3 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4V6T|1|AA|U|1030, 4V6T|1|AA|C|1031

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6T_023 not in the Motif Atlas

Geometric match to HL_6CZR_082

Geometric discrepancy: 0.2757

The information below is about HL_6CZR_082

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50006.1

Basepair signature

cWW-F-F

Number of instances in this motif group

6

Unit IDs

4V6T|1|AA|C|1028
4V6T|1|AA|U|1029
4V6T|1|AA|U|1030
4V6T|1|AA|C|1031
4V6T|1|AA|G|1032
4V6T|1|AA|G|1033

Current chains

Chain AA

16S ribosomal RNA

Nearby chains