HL_4V6T_024
3D structure
- PDB id
- 4V6T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.3 Å
Loop
- Sequence
- UGUGAA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6T_024 not in the Motif Atlas
- Homologous match to HL_6CZR_095
- Geometric discrepancy: 0.2942
- The information below is about HL_6CZR_095
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
4V6T|1|AA|U|1076
4V6T|1|AA|G|1077
4V6T|1|AA|U|1078
4V6T|1|AA|G|1079
4V6T|1|AA|A|1080
4V6T|1|AA|A|1081
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AB
- 30S ribosomal protein S2
- Chain AE
- 30S ribosomal protein S5
Coloring options: