HL_4V6T_033
3D structure
- PDB id
- 4V6T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.3 Å
Loop
- Sequence
- GGGCGGUUGGC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V6T|1|AV|G|53
4V6T|1|AV|G|54
4V6T|1|AV|G|55
4V6T|1|AV|C|56
4V6T|1|AV|G|57
4V6T|1|AV|G|58
4V6T|1|AV|U|59
4V6T|1|AV|U|60
4V6T|1|AV|G|61
4V6T|1|AV|G|62
4V6T|1|AV|C|63
Current chains
- Chain AV
- full length transfer messenger RNA (tmRNA)
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: