HL_4V6T_033

3D structure

PDB id

4V6T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading

Experimental method

ELECTRON MICROSCOPY

Resolution

8.3 Å

Loop

Sequence

GGGCGGUUGGC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6T|1|AV|G|53
4V6T|1|AV|G|54
4V6T|1|AV|G|55
4V6T|1|AV|C|56
4V6T|1|AV|G|57
4V6T|1|AV|G|58
4V6T|1|AV|U|59
4V6T|1|AV|U|60
4V6T|1|AV|G|61
4V6T|1|AV|G|62
4V6T|1|AV|C|63

Current chains

Chain AV

full length transfer messenger RNA (tmRNA)

Nearby chains

Chain BA

Large subunit ribosomal RNA; LSU rRNA