HL_4V6T_069

3D structure

PDB id

4V6T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading

Experimental method

ELECTRON MICROSCOPY

Resolution

8.3 Å

Loop

Sequence

GGCUUAGAAGCAGCC

Length

15 nucleotides

Bulged bases

4V6T|1|BA|A|1070, 4V6T|1|BA|G|1071, 4V6T|1|BA|C|1072

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6T|1|BA|G|1062
4V6T|1|BA|G|1063
4V6T|1|BA|C|1064
4V6T|1|BA|U|1065
4V6T|1|BA|U|1066
4V6T|1|BA|A|1067
4V6T|1|BA|G|1068
4V6T|1|BA|A|1069
4V6T|1|BA|A|1070
4V6T|1|BA|G|1071
4V6T|1|BA|C|1072
4V6T|1|BA|A|1073
4V6T|1|BA|G|1074
4V6T|1|BA|C|1075
4V6T|1|BA|C|1076

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AY

elongation factor G

Chain BI

50S ribosomal protein L11