HL_4V6T_114

3D structure

PDB id

4V6T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading

Experimental method

ELECTRON MICROSCOPY

Resolution

8.3 Å

Loop

Sequence

GUUGCCAGCGGUCCGGCCGGGAACUC

Length

26 nucleotides

Bulged bases

4V6T|1|AA|U|1126, 4V6T|1|AA|C|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6T|1|AA|G|1124
4V6T|1|AA|U|1125
4V6T|1|AA|U|1126
4V6T|1|AA|G|1127
4V6T|1|AA|C|1128
4V6T|1|AA|C|1129
4V6T|1|AA|A|1130
4V6T|1|AA|G|1131
4V6T|1|AA|C|1132
4V6T|1|AA|G|1133
4V6T|1|AA|G|1134
4V6T|1|AA|U|1135
4V6T|1|AA|C|1136
4V6T|1|AA|C|1137
4V6T|1|AA|G|1138
4V6T|1|AA|G|1139
4V6T|1|AA|C|1140
4V6T|1|AA|C|1141
4V6T|1|AA|G|1142
4V6T|1|AA|G|1143
4V6T|1|AA|G|1144
4V6T|1|AA|A|1145
4V6T|1|AA|A|1146
4V6T|1|AA|C|1147
4V6T|1|AA|U|1148
4V6T|1|AA|C|1149

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AI

30S ribosomal protein S9

Chain AJ

30S ribosomal protein S10