HL_4V6T_115

3D structure

PDB id

4V6T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading

Experimental method

ELECTRON MICROSCOPY

Resolution

8.3 Å

Loop

Sequence

UCUGCAACUCGA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6T|1|AA|U|1313
4V6T|1|AA|C|1314
4V6T|1|AA|U|1315
4V6T|1|AA|G|1316
4V6T|1|AA|C|1317
4V6T|1|AA|A|1318
4V6T|1|AA|A|1319
4V6T|1|AA|C|1320
4V6T|1|AA|U|1321
4V6T|1|AA|C|1322
4V6T|1|AA|G|1323
4V6T|1|AA|A|1324

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AM

30S ribosomal protein S13

Chain AN

30S ribosomal protein S14

Chain AS

30S ribosomal protein S19