HL_4V6T_120

3D structure

PDB id

4V6T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading

Experimental method

ELECTRON MICROSCOPY

Resolution

8.3 Å

Loop

Sequence

GCGUAAUAGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6T|1|BA|G|1091
4V6T|1|BA|C|1092
4V6T|1|BA|G|1093
4V6T|1|BA|U|1094
4V6T|1|BA|A|1095
4V6T|1|BA|A|1096
4V6T|1|BA|U|1097
4V6T|1|BA|A|1098
4V6T|1|BA|G|1099
4V6T|1|BA|C|1100

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AY

elongation factor G

Chain B4

50S ribosomal protein L36

Chain BG

50S ribosomal protein L6

Chain BI

50S ribosomal protein L11