HL_4V6T_121

3D structure

PDB id

4V6T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading

Experimental method

ELECTRON MICROSCOPY

Resolution

8.3 Å

Loop

Sequence

ACGCUUAUGCGU

Length

12 nucleotides

Bulged bases

4V6T|1|BA|U|1174, 4V6T|1|BA|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6T|1|BA|A|1169
4V6T|1|BA|C|1170
4V6T|1|BA|G|1171
4V6T|1|BA|C|1172
4V6T|1|BA|U|1173
4V6T|1|BA|U|1174
4V6T|1|BA|A|1175
4V6T|1|BA|U|1176
4V6T|1|BA|G|1177
4V6T|1|BA|C|1178
4V6T|1|BA|G|1179
4V6T|1|BA|U|1180

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BR

50S ribosomal protein L21