HL_4V6V_005

3D structure

PDB id

4V6V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tetracycline resistance protein Tet(O) bound to the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

9.8 Å

Loop

Sequence

GUUUGAUCAUGGC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6V|1|AA|G|11
4V6V|1|AA|U|12
4V6V|1|AA|U|13
4V6V|1|AA|U|14
4V6V|1|AA|G|15
4V6V|1|AA|A|16
4V6V|1|AA|U|17
4V6V|1|AA|C|18
4V6V|1|AA|A|19
4V6V|1|AA|U|20
4V6V|1|AA|G|21
4V6V|1|AA|G|22
4V6V|1|AA|C|23

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AE

30S ribosomal protein S5

Chain AL

30S ribosomal protein S12