HL_4V6V_053

3D structure

PDB id

4V6V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tetracycline resistance protein Tet(O) bound to the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

9.8 Å

Loop

Sequence

CCUUUUGUAUAAUG

Length

14 nucleotides

Bulged bases

4V6V|1|BA|A|574

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6V|1|BA|C|564
4V6V|1|BA|C|565
4V6V|1|BA|U|566
4V6V|1|BA|U|567
4V6V|1|BA|U|568
4V6V|1|BA|U|569
4V6V|1|BA|G|570
4V6V|1|BA|U|571
4V6V|1|BA|A|572
4V6V|1|BA|U|573
4V6V|1|BA|A|574
4V6V|1|BA|A|575
4V6V|1|BA|U|576
4V6V|1|BA|G|577

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B5

50S ribosomal protein L32

Chain BE

50S ribosomal protein L3

Chain BP

50S ribosomal protein L15

Chain BU

50S ribosomal protein L20

Chain BV

50S ribosomal protein L21