HL_4V6V_080
3D structure
- PDB id
- 4V6V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Tetracycline resistance protein Tet(O) bound to the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.8 Å
Loop
- Sequence
- CGAAG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6V_080 not in the Motif Atlas
- Homologous match to HL_5J7L_177
- Geometric discrepancy: 0.2087
- The information below is about HL_5J7L_177
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_80709.3
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
4V6V|1|BA|C|1752
4V6V|1|BA|G|1753
4V6V|1|BA|A|1754
4V6V|1|BA|A|1755
4V6V|1|BA|G|1756
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BT
- 50S ribosomal protein L19
Coloring options: