HL_4V6X_017

3D structure

PDB id

4V6X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

UCGCACGAAA

Length

10 nucleotides

Bulged bases

4V6X|1|A5|A|1371

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6X|1|A5|U|1364
4V6X|1|A5|C|1365
4V6X|1|A5|G|1366
4V6X|1|A5|C|1367
4V6X|1|A5|A|1368
4V6X|1|A5|C|1369
4V6X|1|A5|G|1370
4V6X|1|A5|A|1371
4V6X|1|A5|A|1372
4V6X|1|A5|A|1373

Current chains

Chain A5

28S ribosomal RNA

Nearby chains

Chain A8

5.8S ribosomal RNA; 5.8S rRNA

Chain CC

60S ribosomal protein L4

Chain CL

60S ribosomal protein L13

Chain CN

60S ribosomal protein L15

Chain CY

60S ribosomal protein L26