HL_4V6X_113
3D structure
- PDB id
- 4V6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- CAGCGGAAG
- Length
- 9 nucleotides
- Bulged bases
- 4V6X|1|BC|C|16, 4V6X|1|BC|G|17, 4V6X|1|BC|G|18
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6X_113 not in the Motif Atlas
- Homologous match to HL_3WFS_001
- Geometric discrepancy: 0.2065
- The information below is about HL_3WFS_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V6X|1|BC|C|13
4V6X|1|BC|A|14
4V6X|1|BC|G|15
4V6X|1|BC|C|16
4V6X|1|BC|G|17
4V6X|1|BC|G|18
4V6X|1|BC|A|19
4V6X|1|BC|A|20
4V6X|1|BC|G|21
Current chains
- Chain BC
- E-tRNA
Nearby chains
- Chain A5
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: