HL_4V6X_121

3D structure

PDB id

4V6X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

UCGGCCCACGG

Length

11 nucleotides

Bulged bases

4V6X|1|B2|C|1762, 4V6X|1|B2|G|1763, 4V6X|1|B2|G|1764, 4V6X|1|B2|C|1765, 4V6X|1|B2|C|1766, 4V6X|1|B2|C|1767, 4V6X|1|B2|A|1768, 4V6X|1|B2|C|1769, 4V6X|1|B2|G|1770

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6X|1|B2|U|1761
4V6X|1|B2|C|1762
4V6X|1|B2|G|1763
4V6X|1|B2|G|1764
4V6X|1|B2|C|1765
4V6X|1|B2|C|1766
4V6X|1|B2|C|1767
4V6X|1|B2|A|1768
4V6X|1|B2|C|1769
4V6X|1|B2|G|1770
4V6X|1|B2|G|1771

Current chains

Chain B2

18S ribosomal RNA

Nearby chains