HL_4V6Y_018

3D structure

PDB id

4V6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

4V6Y|1|AA|A|466, 4V6Y|1|AA|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6Y_018 not in the Motif Atlas

Geometric match to HL_5J7L_151

Geometric discrepancy: 0.3561

The information below is about HL_5J7L_151

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80922.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

3

Unit IDs

4V6Y|1|AA|G|462
4V6Y|1|AA|U|463
4V6Y|1|AA|U|464
4V6Y|1|AA|A|465
4V6Y|1|AA|A|466
4V6Y|1|AA|U|467
4V6Y|1|AA|A|468
4V6Y|1|AA|C|469
4V6Y|1|AA|C|470

Current chains

Chain AA

16S ribosomal RNA

Nearby chains