HL_4V6Y_042

3D structure

PDB id

4V6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

4V6Y|1|BA|U|139, 4V6Y|1|BA|G|141

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6Y_042 not in the Motif Atlas

Geometric match to HL_4WF9_011

Geometric discrepancy: 0.2638

The information below is about HL_4WF9_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

4V6Y|1|BA|U|137
4V6Y|1|BA|U|138
4V6Y|1|BA|U|139
4V6Y|1|BA|C|140
4V6Y|1|BA|G|141
4V6Y|1|BA|A|142

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BT

50S ribosomal protein L21