HL_4V6Y_094

3D structure

PDB id

4V6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

GUGCAAUGGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6Y_094 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3143

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

4V6Y|1|BA|G|2323
4V6Y|1|BA|U|2324
4V6Y|1|BA|G|2325
4V6Y|1|BA|C|2326
4V6Y|1|BA|A|2327
4V6Y|1|BA|A|2328
4V6Y|1|BA|U|2329
4V6Y|1|BA|G|2330
4V6Y|1|BA|G|2331
4V6Y|1|BA|C|2332

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain A3

Transfer RNA; tRNA

Chain BM

50S ribosomal protein L14

Chain BW

50S ribosomal protein L24