HL_4V6Z_042

3D structure

PDB id

4V6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

4V6Z|1|BA|U|139, 4V6Z|1|BA|G|141

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6Z_042 not in the Motif Atlas

Geometric match to HL_4KR9_003

Geometric discrepancy: 0.3216

The information below is about HL_4KR9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_16651.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

4V6Z|1|BA|U|137
4V6Z|1|BA|U|138
4V6Z|1|BA|U|139
4V6Z|1|BA|C|140
4V6Z|1|BA|G|141
4V6Z|1|BA|A|142

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BT

50S ribosomal protein L23

Chain BY

50S ribosomal protein L29