HL_4V6Z_055

3D structure

PDB id

4V6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

UUUUGUAUAA

Length

10 nucleotides

Bulged bases

4V6Z|1|BA|A|574

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6Z_055 not in the Motif Atlas

Geometric match to HL_7RQB_011

Geometric discrepancy: 0.1034

The information below is about HL_7RQB_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70546.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

4V6Z|1|BA|U|566
4V6Z|1|BA|U|567
4V6Z|1|BA|U|568
4V6Z|1|BA|U|569
4V6Z|1|BA|G|570
4V6Z|1|BA|U|571
4V6Z|1|BA|A|572
4V6Z|1|BA|U|573
4V6Z|1|BA|A|574
4V6Z|1|BA|A|575

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BL

50S ribosomal protein L15

Chain BR

50S ribosomal protein L21