HL_4V6Z_064
3D structure
- PDB id
- 4V6Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12 Å
Loop
- Sequence
- GUGCUAACGU
- Length
- 10 nucleotides
- Bulged bases
- 4V6Z|1|BA|U|958, 4V6Z|1|BA|C|961
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6Z_064 not in the Motif Atlas
- Geometric match to HL_7A0S_056
- Geometric discrepancy: 0.3291
- The information below is about HL_7A0S_056
- Detailed Annotation
- GNRA with extra cWW
- Broad Annotation
- GNRA with extra cWW
- Motif group
- HL_45359.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
4V6Z|1|BA|G|954
4V6Z|1|BA|U|955
4V6Z|1|BA|G|956
4V6Z|1|BA|C|957
4V6Z|1|BA|U|958
4V6Z|1|BA|A|959
4V6Z|1|BA|A|960
4V6Z|1|BA|C|961
4V6Z|1|BA|G|962
4V6Z|1|BA|U|963
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BB
- 5S ribosomal RNA; 5S rRNA
- Chain BM
- 50S ribosomal protein L16
Coloring options: