HL_4V6Z_100

3D structure

PDB id

4V6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6Z_100 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.2849

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_22584.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

25

Unit IDs

4V6Z|1|BA|C|2551
4V6Z|1|BA|U|2552
4V6Z|1|BA|G|2553
4V6Z|1|BA|U|2554
4V6Z|1|BA|U|2555
4V6Z|1|BA|C|2556
4V6Z|1|BA|G|2557

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain A1

Transfer RNA; tRNA