HL_4V70_014

3D structure

PDB id

4V70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

4V70|1|AA|C|328

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V70_014 not in the Motif Atlas

Homologous match to HL_4LFB_008

Geometric discrepancy: 0.3124

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39665.1

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

4V70|1|AA|A|320
4V70|1|AA|A|321
4V70|1|AA|C|322
4V70|1|AA|U|323
4V70|1|AA|G|324
4V70|1|AA|A|325
4V70|1|AA|G|326
4V70|1|AA|A|327
4V70|1|AA|C|328
4V70|1|AA|A|329
4V70|1|AA|C|330
4V70|1|AA|G|331
4V70|1|AA|G|332
4V70|1|AA|U|333

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AP

30S ribosomal protein S16

Chain AT

30S ribosomal protein S20