HL_4V70_032

3D structure

PDB id

4V70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

4V70|1|AA|C|1136, 4V70|1|AA|C|1137, 4V70|1|AA|G|1139

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V70_032 not in the Motif Atlas

Homologous match to HL_5J7L_025

Geometric discrepancy: 0.3959

The information below is about HL_5J7L_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

4V70|1|AA|G|1134
4V70|1|AA|U|1135
4V70|1|AA|C|1136
4V70|1|AA|C|1137
4V70|1|AA|G|1138
4V70|1|AA|G|1139
4V70|1|AA|C|1140

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AI

30S ribosomal protein S9