HL_4V70_071

3D structure

PDB id

4V70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CGUUAAUCG

Length

9 nucleotides

Bulged bases

4V70|1|BA|U|1325, 4V70|1|BA|U|1329

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V70_071 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.2871

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27483.1

Basepair signature

cWW-F

Number of instances in this motif group

2

Unit IDs

4V70|1|BA|C|1323
4V70|1|BA|G|1324
4V70|1|BA|U|1325
4V70|1|BA|U|1326
4V70|1|BA|A|1327
4V70|1|BA|A|1328
4V70|1|BA|U|1329
4V70|1|BA|C|1330
4V70|1|BA|G|1331

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BN

50S ribosomal protein L17

Chain BS

50S ribosomal protein L22