HL_4V71_045

3D structure

PDB id

4V71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)

Experimental method

ELECTRON MICROSCOPY

Resolution

20 Å

Loop

Sequence

CAACCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V71_045 not in the Motif Atlas

Homologous match to HL_4WF9_007

Geometric discrepancy: 0.1946

The information below is about HL_4WF9_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51020.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

14

Unit IDs

4V71|1|BA|C|225
4V71|1|BA|A|226
4V71|1|BA|A|227
4V71|1|BA|C|228
4V71|1|BA|C|229
4V71|1|BA|G|230

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BL

50S ribosomal protein L15