HL_4V72_005
3D structure
- PDB id
- 4V72 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13 Å
Loop
- Sequence
- GG(OMC)UCAUAACC
- Length
- 11 nucleotides
- Bulged bases
- 4V72|1|A3|U|34
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V72_005 not in the Motif Atlas
- Homologous match to HL_5E6M_002
- Geometric discrepancy: 0.4456
- The information below is about HL_5E6M_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_10874.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
4V72|1|A3|G|31
4V72|1|A3|G|32
4V72|1|A3|OMC|33
4V72|1|A3|U|34
4V72|1|A3|C|35
4V72|1|A3|A|36
4V72|1|A3|U|37
4V72|1|A3|A|38
4V72|1|A3|A|39
4V72|1|A3|C|40
4V72|1|A3|C|41
Current chains
- Chain A3
- tRNA-fMet
Nearby chains
- Chain A2
- 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AI
- 30S ribosomal protein S9
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
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