3D structure

PDB id
4V72 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)
Experimental method
ELECTRON MICROSCOPY
Resolution
13 Å

Loop

Sequence
GAAACAUC
Length
8 nucleotides
Bulged bases
4V72|1|BA|A|196
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V72_044 not in the Motif Atlas
Homologous match to HL_7RQB_006
Geometric discrepancy: 0.1604
The information below is about HL_7RQB_006
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_06192.2
Basepair signature
cWW-tSH-F-F
Number of instances in this motif group
14

Unit IDs

4V72|1|BA|G|194
4V72|1|BA|A|195
4V72|1|BA|A|196
4V72|1|BA|A|197
4V72|1|BA|C|198
4V72|1|BA|A|199
4V72|1|BA|U|200
4V72|1|BA|C|201

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BL
50S ribosomal protein L15
Chain BX
50S ribosomal protein L28

Coloring options:


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