3D structure

PDB id
4V72 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)
Experimental method
ELECTRON MICROSCOPY
Resolution
13 Å

Loop

Sequence
CAUCCCG
Length
7 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V72_063 not in the Motif Atlas
Geometric match to HL_2Y9H_003
Geometric discrepancy: 0.1359
The information below is about HL_2Y9H_003
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75660.6
Basepair signature
cWW-F
Number of instances in this motif group
21

Unit IDs

4V72|1|BA|C|885
4V72|1|BA|A|886
4V72|1|BA|U|887
4V72|1|BA|C|888
4V72|1|BA|C|889
4V72|1|BA|C|890
4V72|1|BA|G|891

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain AM
30S ribosomal protein S13
Chain AS
30S ribosomal protein S19
Chain BF
50S ribosomal protein L5

Coloring options:


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