HL_4V72_066

3D structure

PDB id

4V72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)

Experimental method

ELECTRON MICROSCOPY

Resolution

13 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

4V72|1|BA|A|1070, 4V72|1|BA|A|1073

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V72_066 not in the Motif Atlas

Geometric match to HL_5J7L_143

Geometric discrepancy: 0.1485

The information below is about HL_5J7L_143

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

4V72|1|BA|C|1064
4V72|1|BA|U|1065
4V72|1|BA|U|1066
4V72|1|BA|A|1067
4V72|1|BA|G|1068
4V72|1|BA|A|1069
4V72|1|BA|A|1070
4V72|1|BA|G|1071
4V72|1|BA|C|1072
4V72|1|BA|A|1073
4V72|1|BA|G|1074

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BI

50S ribosomal protein L11