HL_4V72_073

3D structure

PDB id

4V72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)

Experimental method

ELECTRON MICROSCOPY

Resolution

13 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

4V72|1|BA|U|1396, 4V72|1|BA|U|1397

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V72_073 not in the Motif Atlas

Homologous match to HL_4WF9_035

Geometric discrepancy: 0.5969

The information below is about HL_4WF9_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77449.1

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

14

Unit IDs

4V72|1|BA|G|1389
4V72|1|BA|U|1390
4V72|1|BA|U|1391
4V72|1|BA|A|1392
4V72|1|BA|A|1393
4V72|1|BA|U|1394
4V72|1|BA|A|1395
4V72|1|BA|U|1396
4V72|1|BA|U|1397
4V72|1|BA|C|1398

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BT

50S ribosomal protein L23