HL_4V72_093

3D structure

PDB id

4V72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)

Experimental method

ELECTRON MICROSCOPY

Resolution

13 Å

Loop

Sequence

GGUCGGACAUC

Length

11 nucleotides

Bulged bases

4V72|1|BA|A|2309

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V72_093 not in the Motif Atlas

Geometric match to HL_5J7L_143

Geometric discrepancy: 0.1192

The information below is about HL_5J7L_143

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

4V72|1|BA|G|2303
4V72|1|BA|G|2304
4V72|1|BA|U|2305
4V72|1|BA|C|2306
4V72|1|BA|G|2307
4V72|1|BA|G|2308
4V72|1|BA|A|2309
4V72|1|BA|C|2310
4V72|1|BA|A|2311
4V72|1|BA|U|2312
4V72|1|BA|C|2313

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BF

50S ribosomal protein L5