HL_4V72_112

3D structure

PDB id

4V72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)

Experimental method

ELECTRON MICROSCOPY

Resolution

13 Å

Loop

Sequence

G(OMC)UCAUAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V72|1|A3|G|32
4V72|1|A3|OMC|33
4V72|1|A3|U|34
4V72|1|A3|C|35
4V72|1|A3|A|36
4V72|1|A3|U|37
4V72|1|A3|A|38
4V72|1|A3|A|39
4V72|1|A3|C|40

Current chains

Chain A3

tRNA-fMet

Nearby chains

Chain A2

5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain AI

30S ribosomal protein S9

Chain BA

Large subunit ribosomal RNA; LSU rRNA