HL_4V73_094

3D structure

PDB id

4V73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

GGUCGGACAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V73_094 not in the Motif Atlas

Geometric match to HL_7A0S_011

Geometric discrepancy: 0.3232

The information below is about HL_7A0S_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

4V73|1|BA|G|2303
4V73|1|BA|G|2304
4V73|1|BA|U|2305
4V73|1|BA|C|2306
4V73|1|BA|G|2307
4V73|1|BA|G|2308
4V73|1|BA|A|2309
4V73|1|BA|C|2310
4V73|1|BA|A|2311
4V73|1|BA|U|2312
4V73|1|BA|C|2313

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain A1

Transfer RNA; tRNA

Chain BF

50S ribosomal protein L5