HL_4V73_095

3D structure

PDB id

4V73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

GUGCAAUGGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V73_095 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.2807

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

4V73|1|BA|G|2323
4V73|1|BA|U|2324
4V73|1|BA|G|2325
4V73|1|BA|C|2326
4V73|1|BA|A|2327
4V73|1|BA|A|2328
4V73|1|BA|U|2329
4V73|1|BA|G|2330
4V73|1|BA|G|2331
4V73|1|BA|C|2332

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BF

50S ribosomal protein L5

Chain BW

50S ribosomal protein L27