HL_4V74_003
3D structure
- PDB id
- 4V74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 17 Å
Loop
- Sequence
- G(5MU)(PSU)CGAUCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 5MU, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V74_003 not in the Motif Atlas
- Homologous match to HL_5E81_207
- Geometric discrepancy: 0.3119
- The information below is about HL_5E81_207
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.8
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 140
Unit IDs
4V74|1|A1|G|53
4V74|1|A1|5MU|54
4V74|1|A1|PSU|55
4V74|1|A1|C|56
4V74|1|A1|G|57
4V74|1|A1|A|58
4V74|1|A1|U|59
4V74|1|A1|C|60
4V74|1|A1|C|61
Current chains
- Chain A1
- fMet-Val-tRNA-Val
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BF
- 50S ribosomal protein L5
- Chain BM
- 50S ribosomal protein L16
Coloring options: