HL_4V74_027

3D structure

PDB id

4V74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GAUGCAACGC

Length

10 nucleotides

Bulged bases

4V74|1|AA|G|971

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V74_027 not in the Motif Atlas

Geometric match to HL_2Y9H_003

Geometric discrepancy: 0.2254

The information below is about HL_2Y9H_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

4V74|1|AA|G|963
4V74|1|AA|A|964
4V74|1|AA|U|965
4V74|1|AA|G|966
4V74|1|AA|C|967
4V74|1|AA|A|968
4V74|1|AA|A|969
4V74|1|AA|C|970
4V74|1|AA|G|971
4V74|1|AA|C|972

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AI

30S ribosomal protein S9

Chain AJ

30S ribosomal protein S10

Chain AN

30S ribosomal protein S14