HL_4V74_091

3D structure

PDB id

4V74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

4V74|1|BA|G|2250

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V74_091 not in the Motif Atlas

Homologous match to HL_7A0S_052

Geometric discrepancy: 0.4124

The information below is about HL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_85367.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

4V74|1|BA|C|2248
4V74|1|BA|U|2249
4V74|1|BA|G|2250
4V74|1|BA|G|2251
4V74|1|BA|G|2252
4V74|1|BA|G|2253
4V74|1|BA|C|2254
4V74|1|BA|G|2255
4V74|1|BA|G|2256

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain A1

Transfer RNA; tRNA

Chain BM

50S ribosomal protein L16

Chain BW

50S ribosomal protein L27