HL_4V74_098

3D structure

PDB id

4V74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

AGUUCAUAU

Length

9 nucleotides

Bulged bases

4V74|1|BA|U|2473, 4V74|1|BA|U|2474

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V74_098 not in the Motif Atlas

Homologous match to HL_5J7L_193

Geometric discrepancy: 0.4132

The information below is about HL_5J7L_193

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32735.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4V74|1|BA|A|2471
4V74|1|BA|G|2472
4V74|1|BA|U|2473
4V74|1|BA|U|2474
4V74|1|BA|C|2475
4V74|1|BA|A|2476
4V74|1|BA|U|2477
4V74|1|BA|A|2478
4V74|1|BA|U|2479

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L36

Chain BG

50S ribosomal protein L6

Chain BM

50S ribosomal protein L16