3D structure

PDB id
4V75 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)
Experimental method
ELECTRON MICROSCOPY
Resolution
12 Å

Loop

Sequence
CGAUGCAACGCG
Length
12 nucleotides
Bulged bases
4V75|1|AA|G|966, 4V75|1|AA|G|971
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V75_027 not in the Motif Atlas
Geometric match to HL_5E6M_002
Geometric discrepancy: 0.357
The information below is about HL_5E6M_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_38808.1
Basepair signature
cWW-cWW
Number of instances in this motif group
4

Unit IDs

4V75|1|AA|C|962
4V75|1|AA|G|963
4V75|1|AA|A|964
4V75|1|AA|U|965
4V75|1|AA|G|966
4V75|1|AA|C|967
4V75|1|AA|A|968
4V75|1|AA|A|969
4V75|1|AA|C|970
4V75|1|AA|G|971
4V75|1|AA|C|972
4V75|1|AA|G|973

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain A1
Transfer RNA; tRNA
Chain AI
30S ribosomal protein S9
Chain AJ
30S ribosomal protein S10
Chain AN
30S ribosomal protein S14

Coloring options:


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