HL_4V75_049

3D structure

PDB id

4V75 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

GUGACAGCC

Length

9 nucleotides

Bulged bases

4V75|1|BA|G|329, 4V75|1|BA|A|330, 4V75|1|BA|C|331

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V75_049 not in the Motif Atlas

Homologous match to HL_7RQB_012

Geometric discrepancy: 0.2687

The information below is about HL_7RQB_012

Detailed Annotation

T-loop with unstacked turn

Broad Annotation

T-loop

Motif group

HL_08002.9

Basepair signature

cWW-tWH-F-F

Number of instances in this motif group

19

Unit IDs

4V75|1|BA|G|327
4V75|1|BA|U|328
4V75|1|BA|G|329
4V75|1|BA|A|330
4V75|1|BA|C|331
4V75|1|BA|A|332
4V75|1|BA|G|333
4V75|1|BA|C|334
4V75|1|BA|C|335

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BE

50S ribosomal protein L4

Chain BU

50S ribosomal protein L24