HL_4V76_075

3D structure

PDB id

4V76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GCAAAUC

Length

7 nucleotides

Bulged bases

4V76|1|BA|C|1493, 4V76|1|BA|U|1497

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V76_075 not in the Motif Atlas

Homologous match to HL_5J7L_170

Geometric discrepancy: 0.1911

The information below is about HL_5J7L_170

Detailed Annotation

Pseudoknot geometry with 3' bulge

Broad Annotation

No text annotation

Motif group

HL_57176.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

14

Unit IDs

4V76|1|BA|G|1492
4V76|1|BA|C|1493
4V76|1|BA|A|1494
4V76|1|BA|A|1495
4V76|1|BA|A|1496
4V76|1|BA|U|1497
4V76|1|BA|C|1498

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BC

50S ribosomal protein L2

Chain BH

50S ribosomal protein L9