HL_4V76_111

3D structure

PDB id

4V76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

UGAAUGGAAG

Length

10 nucleotides

Bulged bases

4V76|1|BA|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V76_111 not in the Motif Atlas

Homologous match to HL_4WF9_055

Geometric discrepancy: 0.3951

The information below is about HL_4WF9_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

4V76|1|BA|U|2404
4V76|1|BA|G|2405
4V76|1|BA|A|2406
4V76|1|BA|A|2407
4V76|1|BA|U|2408
4V76|1|BA|G|2409
4V76|1|BA|G|2410
4V76|1|BA|A|2411
4V76|1|BA|A|2412
4V76|1|BA|G|2413

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BL

50S ribosomal protein L15