HL_4V78_099

3D structure

PDB id

4V78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)

Experimental method

ELECTRON MICROSCOPY

Resolution

20 Å

Loop

Sequence

CUGAAGUAGG

Length

10 nucleotides

Bulged bases

4V78|1|BA|G|2529

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V78_099 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.2384

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

4V78|1|BA|C|2527
4V78|1|BA|U|2528
4V78|1|BA|G|2529
4V78|1|BA|A|2530
4V78|1|BA|A|2531
4V78|1|BA|G|2532
4V78|1|BA|U|2533
4V78|1|BA|A|2534
4V78|1|BA|G|2535
4V78|1|BA|G|2536

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L36

Chain BG

50S ribosomal protein L6