HL_4V79_001
3D structure
- PDB id
- 4V79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 15 Å
Loop
- Sequence
- CAGCUGGGAG
- Length
- 10 nucleotides
- Bulged bases
- 4V79|1|A1|C|16, 4V79|1|A1|U|17, 4V79|1|A1|G|18, 4V79|1|A1|G|19, 4V79|1|A1|G|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V79_001 not in the Motif Atlas
- Homologous match to HL_6JXM_001
- Geometric discrepancy: 0.1494
- The information below is about HL_6JXM_001
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_20811.4
- Basepair signature
- cWW-cWS-F
- Number of instances in this motif group
- 14
Unit IDs
4V79|1|A1|C|13
4V79|1|A1|A|14
4V79|1|A1|G|15
4V79|1|A1|C|16
4V79|1|A1|U|17
4V79|1|A1|G|18
4V79|1|A1|G|19
4V79|1|A1|G|20
4V79|1|A1|A|21
4V79|1|A1|G|22
Current chains
- Chain A1
- fMet-Val-tRNA-Val
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BF
- 50S ribosomal protein L5
Coloring options: