HL_4V79_013

3D structure

PDB id

4V79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

UGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V79_013 not in the Motif Atlas

Homologous match to HL_4LFB_007

Geometric discrepancy: 0.2915

The information below is about HL_4LFB_007

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

4V79|1|AA|U|296
4V79|1|AA|G|297
4V79|1|AA|A|298
4V79|1|AA|G|299
4V79|1|AA|A|300
4V79|1|AA|G|301

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AE

30S ribosomal protein S5

Chain AL

30S ribosomal protein S12

Chain AQ

30S ribosomal protein S17